Authors: Kazanov M., Roberts S.A., Polak P., Stamatoyannopoulos J., Klimczak L.J., Gordenin D.A., Sunyaev S.R.
APOBEC-Induced Cancer Mutations Are Uniquely Enriched in Early-Replicating, Gene-Dense, and Active Chromatin Regions, Cell Reports 13(6), pp.1103-1109, 2015.
Horizontal gene transfer and genome evolution in Methanosarcina, BMC Evolutionary Biology, 15(1):102,2015.
2015 year
Authors: Kumar S., Ratnikov B.I., Kazanov M., Smith J.W., Cieplak P.
CleavPredict: a platform for reasoning about matrix metalloproteinases proteolytic events, PLoS One, 10(5):e0127877, 2015.
2015 year
Authors: Rodionova I.A., Zuccola H.J., Sorci L., Aleshin A.E., Kazanov M., Ma C.T., Sergienko E., Rubin E.J., Locher C.P., Osterman A.L.
Mycobacterial Nicotinate Mononucleotide Adenylyltransferase: Structure, Mechanism, and Implications for Drug Discovery, Journal of Biological Chemistry, 290(12), pp. 7693-7706, 2015.
2014 year
Authors: Pendlebury D., Wang R., Henin R.D., Hockla A., Soares A.S., Madden B.J., Kazanov M., Radisky E.S.
Sequence and Conformational Specificity in Substrate Recognition: Several Human Kunitz Protease Inhibitor Domains are Specific Substrates of Mezotrypsin, Journal of Biological Chemistry, 289(47), pp.32783-32797, 2014.
2014 year
Authors: Ratnikov B.I., Cieplak P., Gramatikoff K., Pierce J., Eroshkin A., Igarashi Y., Kazanov M., Sun Q, Godzik A., Osterman A., Stec B., Strongin A., Smith J.W.
Basis for substrate recognition and distinction by matrix metalloproteinases, PNAS, 111(40), E4148-4155, 2014.
2014 year
Authors: Sorci L., Brunetti L., Cialabrini L., Mazzola F., Kazanov M., D'Auria S., Ruggieri S., Raffaelli N.
Characterization of bacterial NMN deamidase as a Ser/Lys hydrolase expands diversity of serine amidohydrolases, FEBS Letters, 588(6), pp.1016-1023, 2014.
ANA HEp-2 cells image classification using number, size, shape and localization of targeted cell regions, Pattern Recognition, 47(7), pp. 2360-2366, 2014.
2014 year
Authors: Rueda S., Fathima S., Knight C., Yaqub M., Papageorghiou A., Rahmatullah B., Foi A., Maggioni M., Pepe A., Tohka J., Stebbing R.V., McManigle J.E., Ciurte A., Bresson X., Cuadra M.B., Sun C., Ponomarev G.V., Gelfand M., Kazanov M., Wang C., Chen H., Hung C., Noble J.A.
Evaluation and Comparison of Current Fetal Ultrasound Image Segmentation Methods for Biometric Measurements: A Grand Challenge, IEEE Transactions on Medical Imaging, 33(4), pp.797-813, 2014.
Comparative genomics of metabolic capacities of regulons controlled by cis-regulatory RNA motifs in bacteria, BMC Genomics, 2013, 14:597.
2013 year
Authors: Cialabrini L., Ruggieri S., Kazanov M., Sorci L., Mazzola F., Orsomando G., Osterman A.L., Raffaelli N.
Genomics-guided analysis of NAD recycling yields functional elucidation of COG1058 as a new family of pyrophosphatases, PLoS One. 2013 Jun 12;8(6):e65595.
Functional diversification of ROK-family transcriptional regulators of sugar catabolism in the Thermotogae phylum. Nucleic Acids Res. 2012 Dec 2. Go to publication
Evolution of transcriptional regulation in closely related bacteria. BMC Evol Biol. 2012 Oct 6;12:200. Go to publication
2012 year
Authors: De Ingeniis J., Ratnikov B., D. Richardson A., A. Scott D., Aza-Blanc P., De K., Kazanov M., Pellecchia M., Ronai Z., L. Osterman A., W. Smith J.
Functional specialization in proline biosynthesis of melanoma. PLoS One. 2012;7(9):e45190. Go to publication
2012 year
Authors: De Ingeniis J., Kazanov M., Shatalin K., Gelfand M., L. Osterman A., Sorci L.
Glutamine versus ammonia utilization in the NAD synthetase family Go to publication
2011 year
Authors: Rodionov D., Novichkov P.S., Stavrovskaya E., Rodionova I.A., Li X, Kazanov M., 170, Gerasimova A.V., 60, Kovaleva G., Permina E.A., Laikova O.N., Overbeek R, Romine M.F., Fredrickson J.K., Arkin A.P., Dubchak I, Osterman A.L., Gelfand M.
Comparative genomic reconstruction of transcriptional networks controlling central metabolism in the Shewanella genus. BMC Genomics. 2011 Jun 15;12 Suppl 1:S3. Go to publication
