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Ïóáëèêàöèé íà ñòðàíèöå:    Page: 1 2
2021 year
Authors: Gorbunov K., Lyubetsky V.

Multiplicatively exact algorithms for transformation and reconstruction of directed path-cycle graphs with repeated edges. Mathematics, Oct 14 2021, Vol. 9, No. 20, Art. 2576. DOI: 10.3390/math9202576 (WoS Q1)
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2020 year
Authors: Gorbunov K., Lyubetsky V.

Linear time additively exact algorithm for transformation of chain-cycle graphs for arbitrary costs of deletions and insertions. Mathematics, Vol. 8, No. 11, Art. 2001. DOI: 10.3390/math8112001 (WoS Q1)
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2020 year
Authors: Gorbunov K., Lyubetsky V.

Evolution of mitochondrial genomic structures in metazoans: algorithm and software. The proceedings of International forum «Biotechnology: state of the art and perspectives», Moscow, Russia, October 28–30 2020, Iss. 18, P. 261–262. DOI: 10.37747/2312-640X-2020-18-260-262
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2020 year
Authors: Gorbunov K., Lyubetsky V.

An almost exact linear algorithm for transformation of chain-cycle graphs with optimization of the sum of operation costs. Doklady Mathematics, 2020, Vol. 102, No. 2, P. 376–379. DOI: 10.1134/S1064562420050324
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2020 year
Authors: Gorbunov K., Lyubetsky V.

An almost exact linear complexity algorithm of the shortest transformation of chain-cycle graphs. arXiv:2004.14351 [math.CO], Apr 29 2020.
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2019 year
Authors: Gorbunov K., Lyubetsky V.

Linear algorithm for reconstruction of chromosome structures. The proceedings of International congress «Biotechnology: state of the art and perspectives», Moscow, Russia, February 25–27 2019, Iss. 17, P. 350–351.
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2018 year
Authors: Gorbunov K., Lyubetsky V.

A linear algorithm for restructuring a graph. Automation and Remote Control, 2018, Vol. 79, Iss. 12, P. 2203–2216. DOI: 10.1134/S0005117918120093
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2018 year
Authors: Lyubetsky V., Lyubetskaya E., Gorbunov K.

Linear algorithm for a cyclic graph transformation. Lobachevskii Journal of Mathematics, 2018, Vol. 39, No. 9, P. 1217–1227. DOI: 10.1134/S1995080218090147
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2017 year
Authors: Lyubetsky V., Rubanov L., Gorbunov K., Zverkóv O., Seliverstov A.

Highly conserved elements in mitochondrial genomes of ciliates and monocots. Materials of the IX International Congress “Biotechnology: State of the Art and Prospects of Development”, Moscow, Russia, February 20–22 2017, Part 1, P. 393.
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2017 year
Authors: Lyubetsky V., Gershgorin R., Gorbunov K.

Chromosome structures: reduction of certain problems with unequal gene content and gene paralogs to integer linear programming. BMC Bioinformatics, 2017, Vol. 18, No. 537. doi:10.1186/s12859-017-1944-x, PMID: 29212445 (WoS Q1)
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2017 year
Authors: Gorbunov K., Lyubetsky V.

Transformation of large chromosome structures: an algorithm of equalization of gene contents. CEUR Workshop Proceedings, Feb 23 2018, Vol. 2064, Convergent Cognitive Information Technologies 2017, P. 395–401, in Russian.
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2017 year
Authors: Gorbunov K., Lyubetsky V.

The Minimum-Cost Transformation of Graphs. Doklady Mathematics, 2017, Vol. 96, No. 2, P. 503–505. doi:10.1134/S1064562417050313
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2017 year
Authors: Gorbunov K., Lyubetsky V.

A linear algorithm for the shortest transformation of graphs with different operation costs. Journal of Communications Technology and Electronics, 2017, Vol. 62, No. 6, P. 653–662. doi:10.1134/S1064226917060092
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2017 year
Authors: Gorbunov K., Lyubetsky V.

Algorithm of transformation of a graph into another one with minimal cost. Informatics and it"s applications, 2017, Vol. 11, Iss. 1, P. 79–89 (in Russian). doi:10.14357/19922264170107

2017 year
Authors: Gorbunov K., Lyubetsky V.

Linear algorithm for minimal rearrangement of structures. Problems of Information Transmission, 2017, Vol. 53, Iss. 1, P. 55–72. doi:10.1134/S0032946017010057

2017 year
Authors: Gershgorin R., Gorbunov K., Zverkóv O., Rubanov L., Seliverstov A., Lyubetsky V.

Highly Conserved Elements and Chromosome Structure Evolution in Mitochondrial Genomes in Ciliates. Life, 2017, Vol. 7, No. 9. doi:10.3390/life7010009, PMID: 28264444
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2016 year
Authors: Korolev S., Gorbunov K., Zverkóv O., Seliverstov A., Lyubetsky V.

Degenerate inverted repeats in the genomes of mycobacterium. CEUR Workshop Proceedings (CEUR-WS.org), Selected Papers of the First International Scientific Conference Convergent Cognitive Information Technologies (Convergent 2016), Moscow, Russia, November 25–26 2016, vol. 1763, p. 182–187, in Russian.

2016 year
Authors: Gorbunov K., Lyubetsky V.

A modified algorithm for transformation of chromosomal structures: a condition of absolute exactness. CEUR Workshop Proceedings (CEUR-WS.org), Selected Papers of the First International Scientific Conference Convergent Cognitive Information Technologies (Convergent 2016), Moscow, Russia, November 25–26 2016, vol. 1763, p. 162–172, in Russian.

2016 year
Authors: Lyubetsky V., Gershgorin R., Seliverstov A., Gorbunov K.

Algorithms for Reconstruction of Chromosomal Structures. BMC Bioinformatics, 2016, vol. 17, art. 40, 23 pp. DOI: 10.1186/s12859-016-0878-z, PMID: 26780836
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2015 year
Authors: Gershgorin R., Gorbunov K., Seliverstov A., Lyubetsky V.

Evolution of chromosome structures. Proceedings of the 39th IITP RAS Interdisciplinary Conference & School “Information Technology and Systems 2015” (ITaS’15), Sochi, Russia, Sep 7–11 2005, Moscow: IITP, 2015, P. 105–120.
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2015 year
Authors: Gorbunov K., Gershgorin R., Lyubetsky V.

“Rearrangement and Inference of Chromosome Structures” Molecular Biology, 2015, Vol. 49, No. 3, P. 327–338.

2014 year
Authors: Rusin L., Lyubetskaya E., Gorbunov K., Lyubetsky V.

“Reconciliation of Gene and Species Trees” BioMed Research International, 2014, Vol. 2014, Article ID 642089, 22 pages.
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2012 year
Authors: Lyubetsky V., Rubanov L., Rusin L., Gorbunov K.

"Cubic time algorithms of amalgamating gene trees and building evolutionary scenarios" Biology Direct, 2012, 7:48. PMID: 24513779
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2012 year
Authors: Gorbunov K., Lyubetsky V.

“The problems of reconciling gene and species trees, mapping a gene tree into a species tree, and gene tree inference” Abstracts of the First RECOMB Satellite Conference on Open Problems in Algorithmic Biology (RECOMB-AB), St. Petersburg, Russia, August 27–29 2012.

2012 year
Authors: Gorbunov K., Seliverstov A., Lyubetsky V.

"Geometric Relationship between Parallel Hyperplanes, Quadrics, and Vertices of a Hypercube" Problems of Information Transmission , 2012, 48:2, 185–192
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2012 year
Authors: Gorbunov K., Lyubetsky V.

“Fast Algorithm to Reconstruct a Species Supertree from a Set of Protein Trees” Molecular Biology, 2012, Vol. 46, No. 1, P. 161–167.

2011 year
Authors: Zverkóv O., Gorbunov K., Seliverstov A., Lyubetsky V.

“Protein clustering with accounting for domen architecture” Proceedings of the 54th conference of Moscow Institute of Physics and Technology “Basic and applied research in life sciences and engineering in modern information environment”, Moscow, Russia, November 25–26 2011, Section of Management and applied mathematics, Vol. 2, P. 88–89.

2011 year
Authors: Gorbunov K., Rubanov L., Rusin L., Lyubetsky V.

“An accurate algorithm of cubic complexity to build supertrees” Zitteliana. An International Journal of Palaeontology and Geobiology. Series B, Vol. 30, Abstracts of the international conference “Deep Metazoan Phylogeny 2011 – new data, new challenges", Munchen, Germany, October 11–14 2011, P. 20.

2011 year
Authors: Gorbunov K., Lyubetsky V.

“The tree nearest in average to a given set of trees” Information transmission problems, Vol. 47, Iss. 3, 2011

2010 year
Authors: 154, Gorbunov K., Seliverstov A., Lyubetsky V.

“The evolution of proline synthesis transcription regulation in gamma proteobacteria” Molecular Phylogenetics: Contributions to the 2nd Moscow International Conference “Molecular Phylogenetics” (Moscow, Russia, May 18-21, 2010), Moscow, Torus Press, 2010, pp. 132–133.

2010 year
Authors: Gorbunov K., Lyubetsky V.

“A Fast Algorithm of Building Species Supertrees with a Set of Gene Trees” Proceedings of the Seventh International Conference on Bioinformatics of Genome Regulation and StructureSystems Biology (BGRSSB’2010), Novosibirsk, Russia, 20-27 June 2010, p. 92.

2010 year
Authors: 154, Gorbunov K., Rusin L., Seliverstov A., Lyubetsky V.

“The Evolution of Proline Synthesis Transcriptional Regulation in Gammaproteobacteria” Moscow University Biological Sciences Bulletin, 2010, V. 65, No. 4, pp. 211–212.

2010 year
Authors: Gorbunov K., Laikova O.N., Rodionov D., Gelfand M., Lyubetsky V.

“Evolution of regulatory motifs of bacterial transcription factors” In Silico Biology, 2010, 10, 0012.
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2009 year
Authors: Gorbunov K., Lyubetsky V.

“Inferring gene evolution along a species tree” International Moscow Conference on Computational Molecular Biology: MCCMB’09, pp. 120–121.

2009 year
Authors: Gorbunov K., Lyubetsky V.

“Reconstructing the evolution of genes along the species tree” Molecular Biology, 2009, V. 43, No. 5, pp. 881–893.

2009 year
Authors: Gorbunov K., Lyubetskaya E., Asarin E., Lyubetsky V.

“Modeling evolution of the bacterial regulatory signals involving secondary structure” Molecular Biology, 2009, V. 43, No. 3, pp. 485–499.

2008 year
Authors: Gorbunov K., Kanovei V., Lyubetsky V.

“Inferring optimal scenario of gene evolution along a species tree” Abstracts of The Sixth International Conference on Bioinformatics of Genome Regulation and Structure (BGRS’2008), Novosibirsk, June 22–28, p. 90.
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2007 year
Authors: Lyubetsky V., Seliverstov A., Gorbunov K.

“Models of gene expression regulation and evolution of regulatory elements” Proceedings of the international scientific conference “Computational Phylogenetics and Molecular Systematics, CPMS’2007”, November 16–19 2007, KMK Scientific Press, Moscow, pp. 158–165.

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