Algorithms for the reconstruction of genomic structures with proofs of their low polynomial complexity and high exactness.
Mathematics, March 11 2024, Vol. 12, No. 6, Art. 817.
DOI: 10.3390/math12060817
(WoS Q1) Go to publication
Jensen Reals by Means of Second-Order Peano Arithmetic.
Axioms, 2024, 13(2), Article no 96.
DOI: 10.3390/axioms13020096 (WoS Q2) Go to publicationDownload (248.3 KB)
A good lightface Δ^1_n well-ordering of the reals does not imply the existence of boldface Δ^1_{n−1} well-orderings.
Annals of Pure and Applied Logic,
2024, 175, 6, pp.\ 1-38. DOI 10.1016/j.apal.2024.103426
(WoS Q2) Go to publication
Parameterfree Comprehension does not imply full Comprehension in second order Peano arithmetic.
Studia Logica,
2024, DOI: 10.1007/s11225-024-10108-2
(WoS Q2) Go to publication
2023 year
Authors: Tchesunov A., Nikolaeva O., Rusin L., Sanamyan N., Panina E., Miljutin D., Gorelysheva D., Pegova A., Khromova M., Mardashova M., Mikhailov K., Yushin V., Petrov N., Nikitin M., Lyubetsky V., Aleoshin V.
Paraphyly of Marimermithida refines primary routes of transition to parasitism in roundworms.
Zoological Journal of the Linnean Society, April 2023, Vol. 197, Iss. 4, P. 909–923.
DOI: 10.1093/zoolinnean/zlac070
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2023 year
Authors: Cheng H., Guo Z., Zhang X., Wang X.-J., Li Z., Huo W.-W., Zhong H.-C., Li X.-J., Wu X.-W., Li W.-H., Chen Z.-W., Wu T.-C., Gan X.-F., Zhong B.-L., Lyubetsky V., Rusin L., Yang J., Zhao Q., Cao Q.-D., Yang J.-R.
Lack of evolutionary convergence in multiple primary lung cancer suggests insufficient specificity of personalized therapy.
Journal of Genetics and Genomics, May 2023, Vol. 50, Iss. 5, P. 330–340.
DOI: 10.1016/j.jgg.2022.11.005
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Constructing an evolutionary tree and path–cycle graph evolution along it.
Mathematics, Apr 24 2023, Vol. 11, No. 9, Art. 2024.
DOI: 10.3390/math11092024
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2023 year
Authors: Lyubetsky V., Rubanov L., Tereshina M., Ivanova A., Araslanova K., Uroshlev L., Goremykina G., Yang J., Kanovei V., Zverkóv O., Shitikov A., Korotkova D., Zaraisky A.
Wide-scale identification of novel/eliminated genes responsible for evolutionary transformations.
Biology Direct, 2023, Vol. 18, Art. 45.
DOI: 10.1186/s13062-023-00405-6
(WoS Q2) Go to publication
A model in which well-orderings of the reals first appear at a given
projective level, part III, the case of second-order PA.
Mathematics,
2023, 11(15), Article no. 3294.
DOI 10.3390/math11153294
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A model in which well-orderings of the reals first appear at a given projective level, part II.
Mathematics,
2023, 11(11), Article no. 2517. DOI: 10.3390/math11112517 .
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On the Significance of Parameters in the Choice and Collection Schemata in the 2nd Order Peano Arithmetic.
Mathematics,
2023, 11 (3), Article no. 726.
DOI: 10.3390/math11030726
(WoS Q1) Go to publication
On Russell typicality in Set Theory.
Proceedings of the American Mathematical Society, 2023, 151, no 5, pp. 2201–2210.
https://doi.org/10.1090/proc/16232 (WoS Q2)
Go to publication
Evolution of protein regulators of circadian rhythm in mammals.
Bioinformatics of Genome Regulation and Structure/Systems Biology (BGRS/SB-2022), The Thirteenth International Multiconference Abstracts, Novosibirsk, Russia, 4-8 July 2022, Novosibirsk: ICG SB RAS, 2022, P. 173. Go to publication
On the Significance of Parameters in the Choice and Collection Schemata in the 2nd Order Peano Arithmetic.
Preprints,
2022, no 2022120255.
DOI: 10.20944/preprints202212.0255.v2 Go to publication
The parameterfree Comprehension does not imply the full Comprehension in the 2nd order Peano arithmetic. arXiv: 2209.07599 [math.LO], September 2022. Go to publication
A model in which wellorderings of the reals appear at a given projective level.
Axioms, 2022, 11(8), Article no 354.
DOI: 10.3390/axioms11080354
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A model in which the Separation principle holds for a given effective projective Sigma-class.
arXiv: 2204.03915 [math.LO], April 2022. Go to publication
On the ‘definability of definable’ problem of Alfred Tarski, Part II.
Transactions of the American Mathematical Society,
2022, Vol. 375, No. 12, P. 8651–8686.
DOI: 10.1090/tran/8710
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A model in which the separation principle holds for a given effective projective Sigma-class.
Axioms, 2022, 11, Issue 3, Paper no. 122.
DOI 10.3390/axioms11030122
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A generic model in which the Russell-nontypical sets satisfy ZFC strictly between HOD and the universe.
Mathematics, 2022, 10, Issue 3, Paper no. 491, DOI 10.3390/math10030491
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Complex evolution of Fbxl21 gene in mammals.
Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’21,
Moscow, Russia, July 30 — August 2 2021.
A product forcing model in which the Russell-nontypical sets satisfy ZFC strictly between HOD and the universe. arXiv: 2111.13491 [math.LO], November 2021. Go to publication
Multiplicatively exact algorithms for transformation and reconstruction of directed path-cycle graphs with repeated edges.
Mathematics, Oct 14 2021, Vol. 9, No. 20, Art. 2576.
DOI: 10.3390/math9202576 (WoS Q1) Go to publication
On effectively indiscernible projective sets and the Leibniz-Mycielski axiom.
Mathematics, 2021, Vol. 9, No. 14, Art. 1670.
DOI: 10.3390/math9141670
(WoS Q1) Go to publication
Models of set theory in which separation theorem fails.
Izvestiya: Mathematics, 2021, Vol. 85, No 6,1181-1219.
DOI: https://doi.org/10.1070/IM8937
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Factoring Solovay-random extensions, with application to the Reduction property.
Monatshefte fur Mathematik, 2021, 194, 1, pp. 105–117.
DOI: 10.1007/s00605-020-01482-9
(WoS Q2) Go to publication
The full basis theorem does not imply analytic wellordering,
Annals of pure and applied logic, 2021, volume 172, issue 4, paper no 102929.
DOI: 10.1016/j.apal.2020.102929
(WoS Q1) Go to publication
On the "definability of definable" problem of Alfred Tarski.
Mathematics, 2020, Vol. 8, No. 12, Art. 2214.
DOI: 10.3390/math8122214
(WoS Q1) Go to publication
Linear time additively exact algorithm for transformation of chain-cycle graphs for arbitrary costs of deletions and insertions.
Mathematics,
Vol. 8, No. 11, Art. 2001.
DOI: 10.3390/math8112001
(WoS Q1) Go to publication
Evolution of mitochondrial genomic structures in metazoans: algorithm and software.
The proceedings of International forum «Biotechnology: state of the art and perspectives»,
Moscow, Russia, October 28–30 2020, Iss. 18, P. 261–262.
DOI: 10.37747/2312-640X-2020-18-260-262 Go to publication
Gene loss prediction based on genomic structure.
The proceedings of International forum «Biotechnology: state of the art and perspectives»,
Moscow, Russia, October 28–30 2020, Iss. 18, P. 259–260.
DOI: 10.37747/2312-640X-2020-18-258-260 Go to publication
An almost exact linear algorithm for transformation of chain-cycle graphs with optimization of the sum of operation costs.
Doklady Mathematics,
2020, Vol. 102, No. 2, P. 376–379.
DOI: 10.1134/S1064562420050324 Go to publication
An almost exact linear complexity algorithm of the shortest transformation of chain-cycle graphs.
arXiv:2004.14351 [math.CO], Apr 29 2020. Go to publication
New bioinformatics methods for identification of lost genes and protein isoforms.
Homo sapiens liberatus, Proceedings of the 3rd International Conference in celebration of the 85th birthday of professor V.P. Skulachev, Moscow, Russia, February 20–21 2020, Abstract Book.
Moscow: Torus Press, 2020, P. 41–42.
DOI: 10.30826/HomoSapiens-2020-30 Go to publication
Evolution of proteins involved in response to ROS.
Bioinformatics of Genome Regulation and Structure/Systems Biology (BGRS/SB-2020), The Twelfth International Multiconference Abstracts, Novosibirsk, Russia, 6–10 July 2020.
Novosibirsk: ICG SB RAS, 2020, P. 652–653.
DOI: 10.18699/BGRS/SB-2020-398 Go to publicationDownload (844.5 KB)
Protein-coding genes in Euarchontoglires with pseudogene homologs in humans.
Life, 2020, Vol. 10, No. 9, Art. 192.
DOI: 10.3390/life10090192, PMID: 32927891 Go to publication
Optimal growth temperature and intergenic distances in bacteria, archaea, and plastids of rhodophytic branch.
BioMed Research International, 2020, Vol. 2020, Art. 3465380.
DOI: 10.1155/2020/3465380, PMID: 32025518 Go to publication
Models of set theory in which nonconstructible reals first appear at a given projective level .
Mathematics,
2020, Vol. 8, No. 6, Art. 910.
DOI: 10.3390/math8060910
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Canonization of smooth equivalence relations on infinite-dimensional E0-large products.
Notre Dame Journal of Formal Logic,
2020, Vol. 61, No. 1, P. 117–128.
DOI: 10.1215/00294527-2019-0034
(WoS Q1) Go to publication
Dicyemida and Orthonectida: Two stories of body plan simplification.
Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’19,
Moscow, Russia, July 27–30 2019. Go to publication
Linear algorithm for reconstruction of chromosome structures.
The proceedings of International congress «Biotechnology: state of the art and perspectives»,
Moscow, Russia, February 25–27 2019, Iss. 17, P. 350–351. Go to publication
Mouse genes lost in rodent and primate species with long lifespan.
The proceedings of International congress «Biotechnology: state of the art and perspectives»,
Moscow, Russia, February 25–27 2019, Iss. 17, P. 342. Go to publication
2019 year
Authors: Shilovsky G., Putyatina T., Ashapkin V., Yamskova O., Lyubetsky V., Sorokina E., Shram S., Markov A., Vyssokikh M.
Biological diversity and remodeling of cardiolipin in oxidative stress and age-related pathologies.
Biochemistry (Moscow), 2019, Vol. 84, No. 12, P. 1469–1483.
DOI: 10.1134/S000629791912006X
Set theory: absolute undecidability of classical problems.
Textbook for universities, 2nd ed., Moscow, Urait, 2019, 348 p. (in Russian).
ISBN: 978-5-534-10390-8
