Multiplicatively exact algorithms for transformation and reconstruction of directed path-cycle graphs with repeated edges.
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Linear time additively exact algorithm for transformation of chain-cycle graphs for arbitrary costs of deletions and insertions.
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Evolution of mitochondrial genomic structures in metazoans: algorithm and software.
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An almost exact linear algorithm for transformation of chain-cycle graphs with optimization of the sum of operation costs.
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An almost exact linear complexity algorithm of the shortest transformation of chain-cycle graphs.
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Linear algorithm for reconstruction of chromosome structures.
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A linear algorithm for restructuring a graph.
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Linear algorithm for a cyclic graph transformation.
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Highly conserved elements in mitochondrial genomes of ciliates and monocots.
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Chromosome structures: reduction of certain problems with unequal gene content and gene paralogs to integer linear programming.
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Transformation of large chromosome structures: an algorithm of equalization of gene contents.
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A linear algorithm for the shortest transformation of graphs with different operation costs.
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Algorithm of transformation of a graph into another one with minimal cost.
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Linear algorithm for minimal rearrangement of structures.
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Highly Conserved Elements and Chromosome Structure Evolution in Mitochondrial Genomes in Ciliates.
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Degenerate inverted repeats in the genomes of mycobacterium.
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A modified algorithm for transformation of chromosomal structures: a condition of absolute exactness.
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Algorithms for Reconstruction of Chromosomal Structures.
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“The problems of reconciling gene and species trees, mapping a gene tree into a species tree, and gene tree inference”
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“Protein clustering with accounting for domen architecture”
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“An accurate algorithm of cubic complexity to build supertrees”
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“A Fast Algorithm of Building Species Supertrees with a Set of Gene Trees”
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“The Evolution of Proline Synthesis Transcriptional Regulation in Gammaproteobacteria”
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“Inferring optimal scenario of gene evolution along a species tree”
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