Complex evolution of Fbxl21 gene in mammals.
Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’21,
Moscow, Russia, July 30 — August 2 2021.
Gene loss prediction based on genomic structure.
The proceedings of International forum «Biotechnology: state of the art and perspectives»,
Moscow, Russia, October 28–30 2020, Iss. 18, P. 259–260.
DOI: 10.37747/2312-640X-2020-18-258-260 Go to publication
New bioinformatics methods for identification of lost genes and protein isoforms.
Homo sapiens liberatus, Proceedings of the 3rd International Conference in celebration of the 85th birthday of professor V.P. Skulachev, Moscow, Russia, February 20–21 2020, Abstract Book.
Moscow: Torus Press, 2020, P. 41–42.
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Evolution of proteins involved in response to ROS.
Bioinformatics of Genome Regulation and Structure/Systems Biology (BGRS/SB-2020), The Twelfth International Multiconference Abstracts, Novosibirsk, Russia, 6–10 July 2020.
Novosibirsk: ICG SB RAS, 2020, P. 652–653.
DOI: 10.18699/BGRS/SB-2020-398 Go to publicationDownload (844.5 KB)
Protein-coding genes in Euarchontoglires with pseudogene homologs in humans.
Life, 2020, Vol. 10, No. 9, Art. 192, 10 pp.
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Optimal growth temperature and intergenic distances in bacteria, archaea, and plastids of rhodophytic branch.
BioMed Research International, 2020, Vol. 2020, Art. 3465380, 10 pp.
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Dicyemida and Orthonectida: Two stories of body plan simplification.
Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’19,
Moscow, Russia, July 27–30 2019. Go to publication
Mouse genes lost in rodent and primate species with long lifespan.
The proceedings of International congress «Biotechnology: state of the art and perspectives»,
Moscow, Russia, February 25–27 2019, Iss. 17, P. 342. Go to publication
Screening for mouse genes lost in mammals with long lifespans.
BioData Mining, 2019, Vol. 12, Art. 20.
DOI: 10.1186/s13040-019-0208-x, PMID: 31728160
(WoS Q1) Go to publicationDownload (1.4 MB)
New C-terminal conserved regions of tafazzin, a catalyst of cardiolipin remodeling.
Oxidative Medicine and Cellular Longevity,
Vol. 2019, Art. 2901057.
DOI: 10.1155/2019/2901057, PMID: 31781330 Go to publicationDownload (2.6 MB)
Bioinformatics screening of genes specific for well-regenerating vertebrates reveals c-answer, a regulator of brain development and regeneration.
Cell Reports, Vol. 29, Iss. 4, P. 1027–1040.
DOI: 10.1016/j.celrep.2019.09.038, PMID: 31644900
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Protein clustering and gene loss prediction.
Computer Assisted Mathematics Conference.
Electrotechnical University "LETI" Saint-Petersburg, Russia, July 22-24, 2019. P. 7 Go to publicationDownload (205.8 KB)
Dicyemida and Orthonectida: Two stories of body plan simplification.
Frontiers in Genetics
Vol. 10, Article 443.
DOI: 10.3389/fgene.2019.00443, PMID: 31178892 Go to publicationDownload (6.2 MB)
Bioinformatic screening of genes present only in well regenerating vertebrates reveals novel FGF and purinergic signaling modulator - c-Answer.
bioRxiv, 13 Dec 2018.
DOI: 10.1101/494609 Go to publication
Orthonectida and Dicyemida: Two stories of body plan simplification.
In: Molecular Phylogenetics (Eds.: A. Troitsky, L. Rusin),
Moscow: Torus Press, 2018, P. 3–4.
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Longevity in mammals: lost genes as a determinant.
Bioinformatics of Genome Regulation and Structure\Systems Biology (BGRS\SB-2018): The Eleventh International Conference (20–25 Aug. 2018, Novosibirsk, Russia); Abstracts.
Institute of Cytology and Genetics, Siberian Branch of Russian Academy of Sciences; Novosibirsk State University. –
Novosibirsk: ICG SB RAS, 2018. P. 249.
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Longevity in euarchontoglires: lost genes as a determinant.
FEBS Open Bio,
2018, Vol. 8 (Suppl. 1), P. 456–457;
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Phylogenomic evidence disentangles affinities of the Mesozoa.
Proceedings of the 4th International Congress on Invertebrate Morphology (ICIM4),
Moscow, Russia, August 18–23 2017, P. 55. Go to publication
Evolution and systematics of plastids of rhodophytic branch.
Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’17,
Moscow, Russia, July 27–30 2017, P. 48. Go to publication
Highly conserved elements in mitochondrial genomes of ciliates and monocots.
Materials of the IX International Congress “Biotechnology: State of the Art and Prospects of Development”,
Moscow, Russia, February 20–22 2017, Part 1, P. 393. Go to publication
Finding long highly conserved elements in complete animal genomes.
CEUR Workshop Proceedings,
Feb 23 2018, Vol. 2064, Convergent Cognitive Information Technologies 2017, P. 402–408, in Russian. Go to publication
Novel transmembrane protein c-Answer revealed by bioinformatic screening of genes present only in well regenerating animals.
FEBS Journal, 2017, Vol. 284, Iss. S1, P. 155.
doi:10.1111/febs.14174
Highly Conserved Elements and Chromosome Structure Evolution in Mitochondrial Genomes in Ciliates.
Life, 2017, Vol. 7, No. 9.
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Degenerate inverted repeats in the genomes of mycobacterium.
CEUR Workshop Proceedings (CEUR-WS.org), Selected Papers of the First International Scientific Conference Convergent Cognitive Information Technologies (Convergent 2016), Moscow, Russia, November 25–26 2016, vol. 1763, p. 182–187, in Russian.
A method for identification of highly conserved elements and evolutionary analysis of superphylum Alveolata.
BMC Bioinformatics.
2016, vol. 17, art. 385, 16 pp.
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Regulation of Expression and Evolution of Genes in Plastids of Rhodophytic Branch.
Life, 2016, vol. 6, art. 7, 13 pp.
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A large-scale search for gene losses, gains and syntenic rearrangements in vertebrate animals.
Materials of the VIII Moscow International Congress “Biotechnology: State of the Art and Prospects of Development”, Moscow, March 17–20 2015, Part 1, P. 260–261. Go to publication
A search for genes encoding histidine-containing leader peptides in Actinobacteria.
Proceedings of the 39th IITP RAS Interdisciplinary Conference & School “Information Technology and Systems 2015” (ITaS’15),
Sochi, Russia, Sep 7–11 2005, Moscow: IITP, 2015, P. 53–60. Go to publication
A method of detecting local gene synteny rearrangement.
Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’15,
Moscow, July 16–19 2015, Moscow, IITP RAS, 2015, P. 249–252. Go to publication
Comparative analysis of apicoplast-targeted protein extension lengths in Apicomplexan parasites.
BioMed Research International,
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A database of plastid protein families from red algae and Apicomplexa and expression regulation of the moeB gene.
BioMed Research International,
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“A database of Rhodophyte plastid protein families and regulation of moeB genes”
Abstracts of the Ninth International Conference on Bioinformatics of Genome Regulation and StructureSystems Biology (BGRSSB"2012),
Novosibirsk, Russia, June 23–28 2014, p. 176.
“Gene expression regulation of the PF00480 or PF14340 domain proteins suggests their involvement in sulfur metabolism”
Computational Biology and Chemistry,
2014, vol. 49, p. 7–13. Go to publication
“Rho-dependent attenuation of sulfur metabolism in mycobacteria”
Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’13, Moscow, Russia, July 25–28 2013.
“Comparative analysis of apicoplast-targeted proteins in Toxoplasma gondii and other Apicomplexa species”
Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’13,
Moscow, Russia, July 25–28 2013.
“Elaboration of the Homologous Plastid-Encoded Protein Families that Separate Paralogs in Magnoliophytes”
Mathematical Biology and Bioinformatics,
2013, Vol. 8, No. 1, P. 225–233, (in Russian).
Averaged entropy as conservativity measure of genome regions.
Tambov University Reports. Series: Natural and Technical Sciences.
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Transcription Regulation of Plastid Genes Involved in Sulfate Transport in Viridiplantae.
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