Gene loss prediction based on genomic structure.
The proceedings of International forum «Biotechnology: state of the art and perspectives»,
Moscow, Russia, October 28–30 2020, Iss. 18, P. 259–260.
DOI: 10.37747/2312-640X-2020-18-258-260 Go to publication
New bioinformatics methods for identification of lost genes and protein isoforms.
Homo sapiens liberatus, Proceedings of the 3rd International Conference in celebration of the 85th birthday of professor V.P. Skulachev, Moscow, Russia, February 20–21 2020, Abstract Book.
Moscow: Torus Press, 2020, P. 41–42.
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Evolution of proteins involved in response to ROS.
Bioinformatics of Genome Regulation and Structure/Systems Biology (BGRS/SB-2020), The Twelfth International Multiconference Abstracts, Novosibirsk, Russia, 6–10 July 2020.
Novosibirsk: ICG SB RAS, 2020, P. 652–653.
DOI: 10.18699/BGRS/SB-2020-398 Go to publicationDownload (844.5 KB)
Protein-coding genes in Euarchontoglires with pseudogene homologs in humans.
Life, 2020, Vol. 10, No. 9, Art. 192, 10 pp.
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Optimal growth temperature and intergenic distances in bacteria, archaea, and plastids of rhodophytic branch.
BioMed Research International, 2020, Vol. 2020, Art. 3465380, 10 pp.
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Mouse genes lost in rodent and primate species with long lifespan.
The proceedings of International congress «Biotechnology: state of the art and perspectives»,
Moscow, Russia, February 25–27 2019, Iss. 17, P. 342. Go to publication
Screening for mouse genes lost in mammals with long lifespans.
BioData Mining, 2019, Vol. 12, Art. 20.
DOI: 10.1186/s13040-019-0208-x, PMID: 31728160
(WoS Q1) Go to publicationDownload (1.4 MB)
New C-terminal conserved regions of tafazzin, a catalyst of cardiolipin remodeling.
Oxidative Medicine and Cellular Longevity,
Vol. 2019, Art. 2901057.
DOI: 10.1155/2019/2901057, PMID: 31781330 Go to publicationDownload (2.6 MB)
Bioinformatics screening of genes specific for well-regenerating vertebrates reveals c-answer, a regulator of brain development and regeneration.
Cell Reports, Vol. 29, Iss. 4, P. 1027–1040.
DOI: 10.1016/j.celrep.2019.09.038, PMID: 31644900
(WoS Q1, IF 8) Go to publicationDownload (6.1 MB)
Protein clustering and gene loss prediction.
Computer Assisted Mathematics Conference.
Electrotechnical University "LETI" Saint-Petersburg, Russia, July 22-24, 2019. P. 7 Go to publicationDownload (205.8 KB)
Bioinformatic screening of genes present only in well regenerating vertebrates reveals novel FGF and purinergic signaling modulator - c-Answer.
bioRxiv, 13 Dec 2018.
DOI: 10.1101/494609 Go to publication
Longevity in mammals: lost genes as a determinant.
Bioinformatics of Genome Regulation and Structure\Systems Biology (BGRS\SB-2018): The Eleventh International Conference (20–25 Aug. 2018, Novosibirsk, Russia); Abstracts.
Institute of Cytology and Genetics, Siberian Branch of Russian Academy of Sciences; Novosibirsk State University. –
Novosibirsk: ICG SB RAS, 2018. P. 249.
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Longevity in euarchontoglires: lost genes as a determinant.
FEBS Open Bio,
2018, Vol. 8 (Suppl. 1), P. 456–457;
DOI: 10.1002/2211-5463.12453. Go to publication
Evolution and systematics of plastids of rhodophytic branch.
Proceedings of the International Moscow Conference on Computational Molecular Biology: MCCMB’17,
Moscow, Russia, July 27–30 2017, P. 48. Go to publication
Highly conserved elements in mitochondrial genomes of ciliates and monocots.
Materials of the IX International Congress “Biotechnology: State of the Art and Prospects of Development”,
Moscow, Russia, February 20–22 2017, Part 1, P. 393. Go to publication
Finding long highly conserved elements in complete animal genomes.
CEUR Workshop Proceedings,
Feb 23 2018, Vol. 2064, Convergent Cognitive Information Technologies 2017, P. 402–408, in Russian. Go to publication
Novel transmembrane protein c-Answer revealed by bioinformatic screening of genes present only in well regenerating animals.
FEBS Journal, 2017, Vol. 284, Iss. S1, P. 155.
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Projective-invariant description of a meandering river. Journal of Communications Technology and Electronics, 2017; vol. 62, no. 6, p. 663–668. DOI: 10.1134/S1064226917060201.
Highly Conserved Elements and Chromosome Structure Evolution in Mitochondrial Genomes in Ciliates.
Life, 2017, Vol. 7, No. 9.
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A method for identification of highly conserved elements and evolutionary analysis of superphylum Alveolata.
BMC Bioinformatics.
2016, vol. 17, art. 385, 16 pp.
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Projective-Invariant Description of Meandering River. Information processes. 2016. Vol. 16, no. 3, pp. 281-290 (in Russian) Go to publicationDownload (167 KB)
Easily Computable Invariants for Hypersurface Recognition, Journal of Communications Technology and Electronics, 2015. Vol. 60. No. 12. P. 1429–1431 Go to publicationDownload (111.4 KB)
"Parallelization of nonuniform loops in supercomputers with distributed memory" Journal of Communications Technology and Electronics, 2014, Vol. 59, No. 6, P. 639–646. Download (260.7 KB)
“Gene expression regulation of the PF00480 or PF14340 domain proteins suggests their involvement in sulfur metabolism”
Computational Biology and Chemistry,
2014, vol. 49, p. 7–13. Go to publication
Modeling RNA polymerase interaction in mitochondria of chordates.
Biology Direct. 2012, 7:26.
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“An accurate algorithm of cubic complexity to build supertrees”
Zitteliana. An International Journal of Palaeontology and Geobiology. Series B,
Vol. 30, Abstracts of the international conference “Deep Metazoan Phylogeny 2011 – new data, new challenges", Munchen, Germany, October 11–14 2011, P. 20.
Modeling RNA polymerase competition: the effect of σ-subunit knockout and heat shock on gene transcription level.
Biology Direct. 2011, 6:3.
DOI: 10.1186/1745-6150-6-3, PMID: 21255416 Go to publicationDownload (670.8 KB)
“Lack of Conservation of Bacterial Type Promoters in Plastids of Streptophyta”
Proceedings of the Seventh International Conference on Bioinformatics of Genome Regulation and StructureSystems Biology (BGRSSB’2010), Novosibirsk, Russia, 20-27 June 2010, p. 170.
Interaction between nucleome and plastome: heat shock response regulation in plastids of plants.
Proceedings of the Seventh International Conference on Bioinformatics of Genome Regulation and Structure\Systems Biology (BGRS\SB"2010), Novosibirsk, Russia, June 20–27 2010, P. 161.
“RNA polymerase competition at complementary DNA strands” Proceedings of the Genetics and Selection Meeting and V Congress of the Vavilov Genetics and Selection Society, Moscow, June 21-27 2009, Part II, p. 68.
“Gibbs Field for Evolutionary Analysis of Regulatory Signal of Gene Expression under Constraints on Secondary Structure” The 18th IMACS World Congress on Computational and Applied Mathematics & Applications in Science and Engineering, August 3-5, 2009, The University of Georgia, Athens, GA 30602-7404, USA, ð. 54.
“Multiple alignment based on species tree”
Abstracts of The Sixth International Conference on Bioinformatics of Genome Regulation and Structure (BGRS’2008), Novosibirsk, June 22–28, p. 212. Go to publication
“A model of regulatory signal evolution”
Abstracts of The Sixth International Conference on Bioinformatics of Genome Regulation and Structure (BGRS’2008), Novosibirsk, June 22–28, p. 148. Go to publication
“Gibbs Field Approach for Evolutionary Analysis of Regulatory Signal of Gene Expression” Problems of Information Transmission, 2008, V. 44, No 4, pp. 333–351.
